- WBPaper00060764:swsn-9(ok1354)_downregulated
DESeq2, FDR<0.05 and fold-change 2. (Threshold set by WormBase curator.)
Transcripts that showed significantly decreased expression in RA629 swsn-9(ok1354);rdIs49[Cb-unc-119] comparing to in RA577 swsn-9(ok1354); rdIs52 [Pric-19::swsn-9::gfp; Cb-unc-119] (swsn-9 neuronal rescue) animals at young adult worms.
- WBPaper00060764:swsn-9(ok1354)_upregulated
DESeq2, FDR<0.05 and fold-change 2. (Threshold set by WormBase curator.)
Transcripts that showed significantly increased expression in RA629 swsn-9(ok1354);rdIs49[Cb-unc-119] comparing to in RA577 swsn-9(ok1354); rdIs52 [Pric-19::swsn-9::gfp; Cb-unc-119] (swsn-9 neuronal rescue) animals at young adult worms.
- WBPaper00060661:sensory-neuron_enriched
Fold change > 2, p-value < 0.05.
Transcripts that showed significantly increased expression in sensory neuron (labeled by iaIs25[Pgcy-37::GFP + unc-119(+)]) comparing to in whole worm.
- WBPaper00060661:sensory-neuron_depleted
Fold change > 2, p-value < 0.05.
Transcripts that showed significantly depleted expression in sensory neuron (labeled by iaIs25[Pgcy-37::GFP + unc-119(+)]) comparing to in whole worm.
- WBPaper00055103:thoc-5(wy822)_upregulated
DESeq2, log2 fold change > 2, adjusted p-value < 0.005.
Transcripts that showed significantly increased expression in FACS sorted neuron cells (labelled by pan-neuronal GFP) from edIs6[unc-119::GFP + rol-6(su1006)]; thoc-5(wy822) comparing to in edIs6.
- WBPaper00055103:thoc-5(wy822)_downregulated
DESeq2, log2 fold change > 2, adjusted p-value < 0.005.
Transcripts that showed significantly decreased expression in FACS sorted neuron cells (labelled by pan-neuronal GFP) from edIs6[unc-119::GFP + rol-6(su1006)]; thoc-5(wy822) comparing to in edIs6.
- WBPaper00050859:downregulated_P-granule(-)GFP(-)_vs_control_day1-adult
DESeq2, Benjamini-Hochberg multiple hypothesis corrected p-value < 0.05 and fold change > 2.
Transcripts that showed significantly increased expression in animals lacking P granules by RNAi experiments targeting pgl-1, pgl-3, glh-1 and glh-4, and unc-119-GFP(-), comparing to in control animals, at 1-day post L4 adult hermaphrodite stage.
- WBPaper00050859:downregulated_P-granule(-)GFP(-)_vs_control_day2-adult
DESeq2, Benjamini-Hochberg multiple hypothesis corrected p-value < 0.05 and fold change > 2.
Transcripts that showed significantly decreased expression in animals lacking P granules by RNAi experiments targeting pgl-1, pgl-3, glh-1 and glh-4, and unc-119-GFP(-), comparing to in control animals, at 2-day post L4 adult hermaphrodite stage.
- WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
DESeq2, Benjamini-Hochberg multiple hypothesis corrected p-value < 0.05 and fold change > 2.
Transcripts that showed significantly increased expression in animals lacking P granules by RNAi experiments targeting pgl-1, pgl-3, glh-1 and glh-4, and unc-119-GFP(+), comparing to in control animals, at 2-day post L4 adult hermaphrodite stage.
- WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
DESeq2, Benjamini-Hochberg multiple hypothesis corrected p-value < 0.05 and fold change > 2.
Transcripts that showed significantly decreased expression in animals lacking P granules by RNAi experiments targeting pgl-1, pgl-3, glh-1 and glh-4, and unc-119-GFP(+), comparing to in control animals, at 2-day post L4 adult hermaphrodite stage.