- WBPaper00065623:40
CellRanger, DecontX, Monocle3, Louvain algorithm.
Single-cell RNA-Seq cell group 40 expressed in: Arcade cells and rectal gland subpopulation.
- WBPaper00050887:Lactoferrin_upregulated
Analysis was performed with a paired log rank survival test using Graphpad Prism v.4 software.
Top 40 most up-regulated genes in C. elegans young adult animals fed with the 150ul of LfCD product since embryo stage.
- WBPaper00029237:CUL-3_interacting
Proteins with more than 2 peptides above a score of 40 were accepted as confident matches. In the case of proteins smaller than 10 kDa, single-peptide matches were accepted after manual validation.
Proteins immunopurified with CUL-3 antibody and considered as subunits of the CSN protein complex, according to proteomics analysis.
- WBPaper00029237:CSN-2_interacting
Proteins with more than 2 peptides above a score of 40 were accepted as confident matches. In the case of proteins smaller than 10 kDa, single-peptide matches were accepted after manual validation.
Proteins immunopurified with CSN-2 antibody and considered as subunits of the CSN protein complex, according to proteomics analysis.
- WBPaper00029237:CSN-5_interacting
Proteins with more than 2 peptides above a score of 40 were accepted as confident matches. In the case of proteins smaller than 10 kDa, single-peptide matches were accepted after manual validation.
Proteins immunopurified with CSN-5 antibody and considered as subunits of the CSN protein complex, according to proteomics analysis.
- WBPaper00056009:propionate_upregulated_vitamin-B12_downregulated
EBSeq, Fold change >= 1.5, adjusted p < 0.01.
Transgenes that showed significantly decreased expression after N2 animals grew in 20 nM vitamin B12 (from L1 till L4) comparing to no drug treatment, and increased expression after N2 animals grew in 40 mM propionate + 20 nM vitamin B12, comparing to in 20 nM vitamin B12.