- WBPaper00051304:CEH-23_repressed
Identified by 1 class SAM with FDR=0.59, 1.5 fold gene cutoff.
Transcripts that were repressed by CEH-23 by comparing expression between isp-1(qm150) and ceh-23(ms23);isp-1(qm150).
- WBPaper00051304:CEH-23_activating
Identified by 1 class SAM with FDR=0.59, 1.5 fold gene cutoff.
Transcripts that were activated by CEH-23 by comparing expression between isp-1(qm150) and ceh-23(ms23);isp-1(qm150).
- WBPaper00031850:mdt-15(RNAi)_upregulated
Author used empirical Bayes fitting in limma with multiple hypothesis correction method BH, and considered genes with a P-value < 0.05 to be differentially expressed.
Genes upregulated in mdt-15(RNAi) animals comparing with control.
- WBPaper00065623:23
CellRanger, DecontX, Monocle3, Louvain algorithm.
Single-cell RNA-Seq cell group 23 expressed in: Intestine middle.