- WBPaper00061527:Y39G10AR.18_4775-gld-4
All available microarray datasets for the GPL200 platform (Affymetrix C. elegans Genome Array) were obtained from the GEO repository. This included 2243 individual microarray experiments. These were normalized against each other with the software RMAexpress (Bolstad, 2014). Based on these normalized values, Pearsons correlation coefficients were obtained for each probe-probe pair of the 22,620 probes represented on this array type. The resulting list of correlation coefficients was then ranked to generate the ranked coexpression database with information on each probe represented on the GPL200 platform.
Coexpression clique No. 72, Y39G10AR.18_4775-gld-4, on the genome-wide coexpression clique map for the nematode GPL200 platform.
- WBPaper00055013:HMG-4_interacting_protein
N.A.
Proteins that interact with HMG-4-HA in BAT1967 [hmg-4(bar32[hmg-4-3xHA]) III] at L4 larva stage according to Co-Immunoprecipitation with subsequent Mass Spectrometry analysis.
- WBPaper00060278:atp-2(RNAi)_upregulated
Cufflinks 2.2.1
Transcripts that showed significantly increased expression in glp-4(bn2);atp-2(RNAi), comparing to in glp-4(bn2) animals injected with empty vector.
- WBPaper00040135:heat-shock_upregulated
Proteins with more than 4 fold change in expression level are considered differentially expressed.
Proteins that showed more than 4 fold of expression increase after heat shock.
- WBPaper00040135:heat-shock_downregulated
Proteins with more than 4 fold change in expression level are considered differentially expressed.
Proteins that showed more than 4 fold of expression decrease after heat shock.
- WBPaper00057006:DietaryRestriction_downregulated
edgeR, FDR < 0.05
Transcripts that showed significantly decreased expression in 4-day post L4 adult hermaphrodite N2 anminals after 4 days on dietary restriction, comparing to fully fed animals.