- WBPaper00049083:post-dauer-development_upregulated
Less than 1% false recovery rate (FDR) was used for acceptance of peptide assignment.
Proteins that showed significantly increased expression (>2 fold) during post dauer development in lin-28(n719) comparing to those in continuous development state in lin-28(n719).
- WBPaper00065623:28
CellRanger, DecontX, Monocle3, Louvain algorithm.
Single-cell RNA-Seq cell group 28 expressed in: Intestine posterior.
- WBPaper00049083:post-dauer-development_downregulated
Less than 1% false recovery rate (FDR) was used for acceptance of peptide assignment.
Proteins that showed significantly decreased expression (>2 fold) during post dauer development in lin-28(n719) comparing to those in continuous development state in lin-28(n719).
- [cgc6390]:Cluster_B
hierarchical clustering
Germline-enriched and sex-biased expression profile cluster B.
- WBPaper00050234:lin-28(RNAi)_upregulated
Cuffdiff was used to search for the differentially expressed genes (FDR < 0.1).
Transcripts that showed significantly increased expression in lin-28(RNAi) animals comparing to in control animals.
- WBPaper00050234:lin-28(RNAi)_downregulated
Cuffdiff was used to search for the differentially expressed genes (FDR < 0.1).
Transcripts that showed significantly decreased expression in lin-28(RNAi) animals comparing to in control animals.
- WBPaper00040932:lin-28_regulated_microRNA
Paired t-test. Genes with p-value < 0.05 and fold change >= 1.5 were considered differentially expressed.
MicroRNA that showed differential expression for more than 1.5 fold in the absence of lin-28.