- WBPaper00031850:mdt-15(RNAi)_upregulated
Author used empirical Bayes fitting in limma with multiple hypothesis correction method BH, and considered genes with a P-value < 0.05 to be differentially expressed.
Genes upregulated in mdt-15(RNAi) animals comparing with control.
- WBPaper00031850:mdt-15(RNAi)_downregulated
Author used empirical Bayes fitting in limma with multiple hypothesis correction method BH, and considered genes with a P-value < 0.05 to be differentially expressed.
Genes downregulated in mdt-15(RNAi) animals comparing with control.
- WBPaper00065623:14
CellRanger, DecontX, Monocle3, Louvain algorithm.
Single-cell RNA-Seq cell group 14 expressed in: Differentiated germ.
- WBPaper00034739:RIL17lessRIL14
The normalised data were analysed using a two-way ANOVA, testing for each gene the effects of LINE (N2, DR1350, RIL-14, RIL-17), TREATMENT (non-dauer vs dauer larva-inducing) and the LINE TREATMENT interaction, using a published PERL script.
Genes that showed lower expression in RIL-17 than in RIL-14.