- WBPaper00032454:IR_upregulated
To identify differentially expressed genes, gene expression intensity was compared using a moderated t-test and a Bayes smoothing approach developed for a low number of replicates.
Genes up-regulated following ionizing radiation (IR) treatment.
- WBPaper00050094:mes-6(bn66)_upregulated
Fold change > 2.
Transcripts that showed significantly increased expression in the dissected gonads of mes-6(bn66) dpy-20(e1282)(IV), comparing to in the dissected gonads of dpy-20(e1282)(IV)
- WBPaper00050094:mes-6(bn66)_downregulated
Fold change > 2.
Transcripts that showed significantly decreased expression in the dissected gonads of mes-6(bn66) dpy-20(e1282)(IV), comparing to in the dissected gonads of dpy-20(e1282)(IV)
- WBPaper00056009:propionate_upregulated_vitamin-B12_downregulated
EBSeq, Fold change >= 1.5, adjusted p < 0.01.
Transgenes that showed significantly decreased expression after N2 animals grew in 20 nM vitamin B12 (from L1 till L4) comparing to no drug treatment, and increased expression after N2 animals grew in 40 mM propionate + 20 nM vitamin B12, comparing to in 20 nM vitamin B12.
- WBPaper00065623:20
CellRanger, DecontX, Monocle3, Louvain algorithm.
Single-cell RNA-Seq cell group 20 expressed in: Intestine middle.