- WBPaper00041174:genotype_environment_interaction
two-way ANOVA
Genes with significant variation in expression level with genotype-environment interaction. Expression of these genes change when there are certian combinations of genotype-environment. Genotypes
- WBPaper00041174:genotypic
two-way ANOVA
Genes with variation in expression level across genotypes (AB2, CB4856, RC301, CB4857, N2, HC445).
- WBPaper00041174:genotypic_prime
two-way ANOVA
Genes with significant variation in expression level only across genotypes(AB2, CB4856, RC301, CB4857, N2, HC445), but not environments (control, 25C, High-pH-Salt, Liquid, infection).
- WBPaper00041174:environmental_prime
two-way ANOVA
Genes with significant variation in expression level only across environments(control, 25C, High-pH-Salt, Liquid, infection), but no genotypic variation (AB2, CB4856, RC301, CB4857, N2, HC445).
- WBPaper00062491:sma-3(wk30)_upregulated
Differentiallyexpressed genes between the different genotypes were identified using limma-voom. Fold change > 2.
Transcripts that showed significantly increaseded expression in sma-3(wk30) comparing to in N2 at L2 larva stage.
- WBPaper00062491:sma-3(wk30)_downregulated
Differentiallyexpressed genes between the different genotypes were identified using limma-voom. Fold change > 2.
Transcripts that showed significantly decreaseded expression in sma-3(wk30) comparing to in N2 at L2 larva stage.
- WBPaper00040858:eQTL_regulated_juvenile
Authors permuted transcript values and used a genome-wide threshold of log10 P-value = 2, which resembles a false discovery rate (FDR) of 0.0129.
Genes with expression level regulated by genotype (N2 vs CB4856) at L3 larva stage
- WBPaper00040858:eQTL_regulated_reproductive
Authors permuted transcript values and used a genome-wide threshold of log10 P-value = 2, which resembles a false discovery rate (FDR) of 0.0118.
Genes with expression level regulated by genotype (N2 vs CB4856) at Late reproduction stage (96 hours at 24 centigrade).
- WBPaper00040858:eQTL_regulated_old
Authors permuted transcript values and used a genome-wide threshold of log10 P-value = 2, which resembles a false discovery rate (FDR) of 0.0136.
Genes with expression level regulated by genotype (N2 vs CB4856) at Old adults stage (214 hours at 24 centigrade).