- WBPaper00032003:ced-1(e1735)_upregulated
The microarray data were subjected to the Robust Multichip Averaging (RMA) Algorithm by using Partek Software (Partek, Inc., St. Charles, Missouri). GeneSpringSoftware9.0(AgilentTechnologies) was used to perform hierarchial cluster analysis.
Genes that showed increased expression in ced-1(e1735) comparing with in N2.
- WBPaper00044246:pgrn-1_ced-3_ced-1_downregulated
Differential expression analysis was performed using the EdgeR Bioconductor package (19910308), and differentially expressed genes were selected based on False Discovery Rate (FDR Benjamini Hochberg adjusted p-values) estimated at <=5%.
Genes differentially expressed in pgrn-1(tm985), ced-3(n717) and ced-1(e1735) as compared to N2E.
- WBPaper00044246:pgrn-1_ced-3_ced-1_upregulated
Differential expression analysis was performed using the EdgeR Bioconductor package (19910308), and differentially expressed genes were selected based on False Discovery Rate (FDR Benjamini Hochberg adjusted p-values) estimated at <=5%.
Genes differentially expressed in pgrn-1(tm985), ced-3(n717) and ced-1(e1735) as compared to N2E.
- WBPaper00044246:pgrn-1_ced-3_upregulated
Differential expression analysis was performed using the EdgeR Bioconductor package (19910308), and differentially expressed genes were selected based on False Discovery Rate (FDR Benjamini Hochberg adjusted p-values) estimated at <=5%.
Genes differentially expressed in pgrn-1(tm985) and ced-3(n717) but not in ced-1(e1735) as compared to N2E.
- WBPaper00044246:ced-3_ced-1_upregulated
Differential expression analysis was performed using the EdgeR Bioconductor package (19910308), and differentially expressed genes were selected based on False Discovery Rate (FDR Benjamini Hochberg adjusted p-values) estimated at <=5%.
Genes differentially expressed in ced-3(n717) and ced-1(e1735) but not in pgrn-1(tm985) as compared to N2E.
- WBPaper00044246:pgrn-1_ced-3_downregulated
Differential expression analysis was performed using the EdgeR Bioconductor package (19910308), and differentially expressed genes were selected based on False Discovery Rate (FDR Benjamini Hochberg adjusted p-values) estimated at <=5%.
Genes differentially expressed in pgrn-1(tm985) and ced-3(n717) but not in ced-1(e1735) as compared to N2E.
- WBPaper00044246:pgrn-1_ced-1_upregulated
Differential expression analysis was performed using the EdgeR Bioconductor package (19910308), and differentially expressed genes were selected based on False Discovery Rate (FDR Benjamini Hochberg adjusted p-values) estimated at <=5%.
Genes differentially expressed in pgrn-1(tm985) and ced-1(e1735) but not in ced-3(n717) as compared to N2E.
- WBPaper00044246:pgrn-1_ced-1_downregulated
Differential expression analysis was performed using the EdgeR Bioconductor package (19910308), and differentially expressed genes were selected based on False Discovery Rate (FDR Benjamini Hochberg adjusted p-values) estimated at <=5%.
Genes differentially expressed in pgrn-1(tm985) and ced-1(e1735) but not in ced-3(n717) as compared to N2E.
- WBPaper00044246:ced-3_ced-1_downregulated
Differential expression analysis was performed using the EdgeR Bioconductor package (19910308), and differentially expressed genes were selected based on False Discovery Rate (FDR Benjamini Hochberg adjusted p-values) estimated at <=5%.
Genes differentially expressed in ced-3(n717) and ced-1(e1735) but not in pgrn-1(tm985) as compared to N2E.