- WBPaper00029047:atx-3_upregulated
Differentially expressed (DE) genes were selected using a Bayesian approach with a false discovery rate of 0.1%.
Genes that showed significantly increased expression in both atx-3(gk193) and atx-3(tm1689) comparing with N2.
- WBPaper00029047:atx-3_downregulated
Differentially expressed (DE) genes were selected using a Bayesian approach with a false discovery rate of 0.1%.
Genes that showed significantly decreased expression in both atx-3(gk193) and atx-3(tm1689) comparing with N2.
- WBPaper00038357:atx-3_regulated_heat-shock
A 5% peptide false positive rate was chosen and only proteins identified by two or more peptides were selected.
Proteins that changed expression level after heat shock in atx-3(gk193) and atx-3(tm1689) comparing to N2.
- WBPaper00038357:atx-3_regulated_basal
A 5% peptide false positive rate was chosen and only proteins identified by two or more peptides were selected.
Proteins that changed expression level at basal level in atx-3(gk193) and atx-3(tm1689) comparing to N2.
- WBPaper00065945:global-rpoa-2(-)_upregulated_transcript
DESeq2, fold change >= 2, FDR < 0.05.
Transcripts that showed significantly increased expression in global RPOA-2-depleted L1 animals (degron-GFP-rpoa-2;eft-3p-TIR1, +IAA), compared to controls (degron-GFP-rpoa-2,+IAA).
- WBPaper00045217:prg-1_progressively_regulated
Genes with more than 2-fold change in expression level are considered differentially expressed.
Genes altered by more than 2-Fold in late versus early generation prg-1 mutants and prg-1; daf-2 mutants. Samples include prg-1(pk2290), prg-1(n4357), prg-1(tm872), prg-1(pk2290); daf-2(e1368), prg-1(pk2290); daf-2(e1370), prg-1(tm872); daf-2(e1370), prg-1(tm872); daf-2(m41).