- WBPaper00048929:ethosuximide_upregulated
FDR corrected p-value < 0.01, and calculated mean fold change > 2 or < -2 in all four strains analysed.
Genes that showed significantly increased expression in all four strains (N2, CZ1200, dnj-17(ok237) and dnj-14(tm3223)) after exposure to 1 mg per ml ethosuximide.
- WBPaper00048929:ethosuximide_downregulated
FDR corrected p-value < 0.01, and calculated mean fold change > 2 or < -2 in all four strains analysed.
Genes that showed significantly decreased expression in all four strains (N2, CZ1200, dnj-17(ok237) and dnj-14(tm3223)) after exposure to 1 mg per ml ethosuximide.
- WBPaper00065623:17
CellRanger, DecontX, Monocle3, Louvain algorithm.
Single-cell RNA-Seq cell group 17 expressed in: sh2 (gonadal sheath distal).
- WBPaper00034739:RIL17lessRIL14
The normalised data were analysed using a two-way ANOVA, testing for each gene the effects of LINE (N2, DR1350, RIL-14, RIL-17), TREATMENT (non-dauer vs dauer larva-inducing) and the LINE TREATMENT interaction, using a published PERL script.
Genes that showed lower expression in RIL-17 than in RIL-14.
- WBPaper00034739:RIL17moreRIL14
The normalised data were analysed using a two-way ANOVA, testing for each gene the effects of LINE (N2, DR1350, RIL-14, RIL-17), TREATMENT (non-dauer vs dauer larva-inducing) and the LINE TREATMENT interaction, using a published PERL script.
Genes that showed higher expression in RIL-17 than in RIL-14.
- WBPaper00065984:pals-17(syb3980)_upregulated
Differential expression analyses were performed using limma-voom in Galaxy, adj p <= 0.05, logFC > 2
Transcripts that showed significantly increased expression in pals-17(syb3980) comparing to in N2 animals at young adult stage.