Alleles for which the sequence change is known are listed in boldface.
The following phenotypes have been observed in egl-19:
Phenotype | Entities Affected | Supporting Evidence |
---|---|---|
paralyzed arrested elongation two fold | Allele: n2368ad979
details
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drug resistant | Allele: tr84 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals were resistant to population growth retardation induced by nemadipine-A, a dihydropyridine (DHP) analog. Treatment: Animals were treated with various concentrations of nemadipine in DMSO. details
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drug resistant | Allele: tr77 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals were resistant to population growth retardation induced by nemadipine-A, a dihydropyridine (DHP) analog. Treatment: Animals were treated with various concentrations of nemadipine in DMSO. details
| |
drug resistant | Allele: tr74 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals were resistant to population growth retardation induced by nemadipine-A, a dihydropyridine (DHP) analog. In addition, L1 and L2 exhibited variable morphology at concentrations significantly greater than the concentration that induced Vab in wild-type larvae. Treatment: Animals were treated with various concentrations of nemadipine in DMSO. details
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eating variant | Allele: n2368 Curator: Karen Yook
Ease of scoring: Es3 easy to score Person evidence: Jonathan Hodgkin Remark: Eat. n2368/+ has a phenotype similar to but weaker than n2368. Semi dominant: Person_evidence; Curator_confirmed details
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constitutive egg laying | Allele: tr89 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals retained fewer embryos in utero than wild-type. Treatment: DMSO control conditions details
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short | Allele: ad695 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Variation effect: Hypermorph gain of function; Curator_confirmed; Paper_evidence details
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drug resistant | Allele: tr75 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals were resistant to population growth retardation induced by nemadipine-A, a dihydropyridine (DHP) analog. Treatment: Animals were treated with various concentrations of nemadipine in DMSO. details
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short | Allele: | |
thin | Allele: n2368
details
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short | Allele: n2368 Curator: Karen Yook; Chris Grove
Paper evidence: Yemini E, Jucikas T, Grundy LJ, Brown AE & Schafer WR, 2013; Kwok TC et al., 2008 Variation effect: Hypermorph gain of function; Curator_confirmed; Paper_evidence details
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backward point velocity variant | Allele: n2368
details
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spicules protrude |
| Allele: tr76 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Males had protruded spicules (Prc). The Prc phenotype was suppressed by nemadipine. Treatment: nemadipine Variation effect: Hypermorph gain of function; Curator_confirmed; Paper_evidence details
|
constitutive egg laying | Allele: tr92 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals retained fewer embryos in utero than wild-type. Treatment: DMSO control conditions details
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egg laying response to drug variant | go-term: oviposition, abnormal | Allele: tr74 Affected by molecule: nemadipine-A
Curator: Karen Yook Paper evidence: Kwok TC et al., 2008 Remark: Animals continued to retain eggs after treatment with the dihydropyridine (DHP) analog nemadipine compared with control animals treated with DMSO alone. Treatment: 5uM nemadipine in DMSO or DMSO alone details
|
terminal bulb relaxation variant |
| Allele: ad695 Curator: Jolene S. Fernandes
Paper evidence: Avery L, 1993 Semi dominant: Curator_confirmed; Paper_evidence details
|
multipolar neuron | anatomy-term: ALM, abnormal | Allele: n2368 Curator: Karen Yook
Paper evidence: Buddell, Tyler & Quinn, Christopher C, 2021 Remark: In egl-19(gof) mutants, where a short process extends from the posterior side of the ALM cell body, whereas, in wild-type, a single process extends from the anterior side of the ALM cell body. details
|
drug resistant | Allele: tr79 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals were resistant to population growth retardation induced by nemadipine-A, a dihydropyridine (DHP) analog. In addition, L1 and L2 exhibited variable morphology at concentrations significantly greater than the concentration that induced Vab in wild-type larvae. Treatment: Animals were treated with various concentrations of nemadipine in DMSO. details
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drug resistant | Allele: tr139 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals were resistant to population growth retardation induced by nemadipine-A, a dihydropyridine (DHP) analog. Treatment: Animals were treated with various concentrations of nemadipine in DMSO. details
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sluggish | Allele: | |
egg laying serotonin resistant | Allele: n582 Curator: Carol Bastiani
Paper evidence: Trent C, Tsung N & Horvitz HR, 1983 Treatment: 5 mg/ml serotonin details
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constitutive egg laying | Allele: tr132 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals retained fewer embryos in utero than wild-type. Treatment: DMSO control conditions details
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frequency of body bend variant | Allele: n2368
details
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paralyzed arrested elongation two fold | life-stage: elongating embryo Ce, abnormal | Allele: st553 Curator: Jolene S. Fernandes
Paper evidence: Williams BD & Waterston RH, 1994 Remark: Severe Pat phenotype: Embryos are paralyzed at the 1.5-fold stage. details
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path curvature increased | Allele: n2368
details
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terminal bulb relaxation variant | Allele: n2368 Curator: Karen Yook
Person evidence: Jonathan Hodgkin Remark: Delayed relaxation and repolarization of terminal bulb. n2368/+ has a phenotype similar to but weaker than n2368. Semi dominant: Person_evidence; Curator_confirmed details
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spicules protrude |
| Allele: tr86 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Males had protruded spicules (Prc). The Prc phenotype was suppressed by nemadipine. Treatment: nemadipine Variation effect: Hypermorph gain of function; Curator_confirmed; Paper_evidence details
|
drug resistant | Allele: tr132 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals were resistant to population growth retardation induced by nemadipine-A, a dihydropyridine (DHP) analog. In addition, L1 and L2 exhibited variable morphology at concentrations significantly greater than the concentration that induced Vab in wild-type larvae. Treatment: Animals were treated with various concentrations of nemadipine in DMSO. details
| |
backward locomotion variant | Allele: n2368
details
| |
axon termination defective | anatomy-term: ALM, abnormal | Allele: n2368 Curator: Karen Yook
Paper evidence: Buddell, Tyler & Quinn, Christopher C, 2021 Remark: In egl-19(gof) mutants, we observed overextended ALM axons, where the axon extended past its normal termination point and terminated within the tip of the nose, whereas in wild-type, the axon terminates posterior to the tip of the nose. details
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early eggs laid | Allele: ad695
details
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locomotion variant | Allele: ad695 Curator: Gary C. Schindelman
Paper evidence: Reiner DJ, Weinshenker DZ & Thomas JH, 1995 Remark: Mild locomotion defect. details
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fewer eggs in utero | Allele: ad695
details
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body posture amplitude decreased | Allele: n2368
details
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drug resistant | Allele: tr85 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals were resistant to population growth retardation induced by nemadipine-A, a dihydropyridine (DHP) analog. Treatment: Animals were treated with various concentrations of nemadipine in DMSO. details
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muscle cell activity variant | anatomy-term: vulval muscle, abnormal | Allele: n2368 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Person evidence: Jonathan Hodgkin Remark: Animals were myotonic.; Vulval muscles show spontaneous contraction. n2368/+ has a phenotype similar to but weaker than n2368. Variation effect: Hypermorph gain of function; Curator_confirmed; Paper_evidence details
|
bloated | Allele: n582 Curator: Karen Yook
Ease of scoring: Es3 easy to score Paper evidence: Riddle DL, Blumenthal TE, Meyer BJ & Priess JR, 1997 Remark: moderate bloating; n582/Df more severe phenotypes; easy to score (ES3) in adult, difficult to score (ES2) at other stages details
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drug resistant | Allele: tr72 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals were resistant to population growth retardation induced by nemadipine-A, a dihydropyridine (DHP) analog. Treatment: Animals were treated with various concentrations of nemadipine in DMSO. details
| |
embryonic lethal | Allele: | |
spicules protrude |
| Allele: tr71 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Males had protruded spicules (Prc). The Prc phenotype was suppressed by nemadipine. Treatment: nemadipine Variation effect: Hypermorph gain of function; Curator_confirmed; Paper_evidence details
|
early eggs laid | Allele: n2368
details
| |
drug resistant | Allele: n582 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals were resistant to population growth retardation induced by nemadipine-A, a dihydropyridine (DHP) analog. In addition, L1 and L2 exhibited variable morphology at concentrations significantly greater than the concentration that induced Vab in wild-type larvae. Treatment: Animals were treated with various concentrations of nemadipine in DMSO. Variation effect: Hypomorph reduction of function; Curator_confirmed; Paper_evidence details
| |
constitutive egg laying | Allele: tr79 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals retained fewer embryos in utero than wild-type. Treatment: DMSO control conditions details
| |
drug resistant | Allele: tr73 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals were resistant to population growth retardation induced by nemadipine-A, a dihydropyridine (DHP) analog. In addition, L1 and L2 exhibited variable morphology at concentrations significantly greater than the concentration that induced Vab in wild-type larvae. Treatment: Animals were treated with various concentrations of nemadipine in DMSO. details
| |
embryonic lethal | Allele: st556 Curator: Karen Yook
Person evidence: Jonathan Hodgkin Remark: embryonic lethal, probable null phenotype details
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turning frequency variant | Allele: n2368
details
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drug resistant | Allele: tr92 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals were resistant to population growth retardation induced by nemadipine-A, a dihydropyridine (DHP) analog. In addition, L1 and L2 exhibited variable morphology at concentrations significantly greater than the concentration that induced Vab in wild-type larvae. Treatment: Animals were treated with various concentrations of nemadipine in DMSO. details
| |
dumpy | Allele: ad695 Curator: Gary C. Schindelman; Jolene S. Fernandes
Paper evidence: Avery L, 1993; Reiner DJ, Weinshenker DZ & Thomas JH, 1995 Remark: Slightly dumpy Semi dominant: Curator_confirmed; Paper_evidence details
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spicules protrude |
| Allele: tr92 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Males had protruded spicules (Prc). The Prc phenotype was suppressed by nemadipine. Treatment: nemadipine Variation effect: Hypermorph gain of function; Curator_confirmed; Paper_evidence details
|
forward point velocity variant | Allele: n2368
details
| |
spicules protrude |
| Allele: tr132 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Males had protruded spicules (Prc). The Prc phenotype was suppressed by nemadipine. Treatment: nemadipine Variation effect: Hypermorph gain of function; Curator_confirmed; Paper_evidence details
|
drug resistant | Allele: tr89 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals were resistant to population growth retardation induced by nemadipine-A, a dihydropyridine (DHP) analog. In addition, L1 and L2 exhibited variable morphology at concentrations significantly greater than the concentration that induced Vab in wild-type larvae. Treatment: Animals were treated with various concentrations of nemadipine in DMSO. details
| |
locomotion variant | Allele: n2368 Curator: Gary C. Schindelman
Paper evidence: Reiner DJ, Weinshenker DZ & Thomas JH, 1995 Remark: Severe locomotion defect. details
| |
spicules protrude |
| Allele: tr73 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Males had protruded spicules (Prc). The Prc phenotype was suppressed by nemadipine. Treatment: nemadipine Variation effect: Hypermorph gain of function; Curator_confirmed; Paper_evidence details
|
spicules protrude |
| Allele: tr89 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Males had protruded spicules (Prc). The Prc phenotype was suppressed by nemadipine. Treatment: nemadipine Variation effect: Hypermorph gain of function; Curator_confirmed; Paper_evidence details
|
egg laying response to drug variant | go-term: oviposition, abnormal | Allele: tr93 Affected by molecule: nemadipine-A
Curator: Karen Yook Paper evidence: Kwok TC et al., 2008 Remark: The number of eggs in utero of worms treated with the dihydropyridine (DHP) analog nemadipine, did not significantly differ from in utero numbers of animals treated with DMSO alone. Treatment: 5uM nemadipine in DMSO or DMSO alone details
|
sterile | Allele: tm8983 Curator: Karen Yook
Person evidence: National Bioresource Project c/o Dr. Shohei Mitani Remark: Classified as lethal OR sterile by the National BioResource Project of Japan. details
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multipolar neuron | anatomy-term: ALM, abnormal | Allele: tr134 Curator: Karen Yook
Paper evidence: Buddell, Tyler & Quinn, Christopher C, 2021 Remark: In egl-19(gof) mutants, where a short process extends from the posterior side of the ALM cell body, whereas, in wild-type, a single process extends from the anterior side of the ALM cell body. details
|
drug resistant | Allele: tr81 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals were resistant to population growth retardation induced by nemadipine-A, a dihydropyridine (DHP) analog. In addition, L1 and L2 exhibited variable morphology at concentrations significantly greater than the concentration that induced Vab in wild-type larvae. Treatment: Animals were treated with various concentrations of nemadipine in DMSO. details
| |
constitutive egg laying | Allele: n2368 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals retained fewer embryos in utero than wild-type. Treatment: DMSO control conditions Variation effect: Hypermorph gain of function; Curator_confirmed; Paper_evidence details
| |
drug resistant | Allele: tr140 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals were resistant to population growth retardation induced by nemadipine-A, a dihydropyridine (DHP) analog. Treatment: Animals were treated with various concentrations of nemadipine in DMSO. details
| |
male tail morphology variant | Allele: n2368 Curator: Karen Yook
Person evidence: Jonathan Hodgkin Remark: Mab. n2368/+ has a phenotype similar to but weaker than n2368. details
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egg laying defective | Allele: n582 Affected by molecule: nemadipine-A
Curator: Karen Yook Paper evidence: Kwok TC et al., 2008 Remark: Animals retained significantly more eggs in utero than wild-type worms. Treatment: DMSO control conditions. Variation effect: Hypomorph reduction of function; Curator_confirmed; Paper_evidence details
| |
spicules protrude |
| Allele: tr81 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Males had protruded spicules (Prc). The Prc phenotype was suppressed by nemadipine. Treatment: nemadipine Variation effect: Hypermorph gain of function; Curator_confirmed; Paper_evidence details
|
dumpy | Allele: n2368 Curator: Gary C. Schindelman; Karen Yook
Paper evidence: Reiner DJ, Weinshenker DZ & Thomas JH, 1995 Person evidence: Jonathan Hodgkin Remark: Dpy: may be due to body muscles hypercontraction. n2368/+ has a phenotype similar to but weaker than n2368. details
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cell physiology phenotype | Allele: ad1006 Curator: Karen Yook
Paper evidence: Stout RF & Parpura V, 2011 Remark: When measuring Ca2+ excitability of CEPsh cells in response to high extracellular potassium (HiK+), worms did not have changes to the proportion of non-responders when compared to control cells originating from the background strain. | In cells of egl-19 mutants, the Cat. 2 responses had a reduced preponderance when compared to the background. | Cultured CEPsh glial cells from mutant worms exhibit altered intracellular calcium-based responses to depolarization. details
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drug resistant | Allele: tr90 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals were resistant to population growth retardation induced by nemadipine-A, a dihydropyridine (DHP) analog. Treatment: Animals were treated with various concentrations of nemadipine in DMSO. details
| |
constitutive egg laying | Allele: tr69 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals retained fewer embryos in utero than wild-type. Treatment: DMSO control conditions details
| |
embryonic lethal | Allele: st576 Curator: Karen Yook
Person evidence: Jonathan Hodgkin Remark: embryonic lethal, probable null phenotype details
| |
drug resistant | Allele: tr76 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals were resistant to population growth retardation induced by nemadipine-A, a dihydropyridine (DHP) analog. In addition, L1 and L2 exhibited variable morphology at concentrations significantly greater than the concentration that induced Vab in wild-type larvae. Treatment: Animals were treated with various concentrations of nemadipine in DMSO. details
| |
paralyzed arrested elongation two fold | life-stage: elongating embryo Ce, abnormal | Allele: st556 Curator: Karen Yook; Jolene S. Fernandes
Paper evidence: Williams BD & Waterston RH, 1994 Person evidence: Jonathan Hodgkin Remark: severe Pat, probable null phenotype; Severe Pat phenotype: Embryos are paralyzed at the 1.5-fold stage. details
|
spicules protrude |
| Allele: tr79 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Males had protruded spicules (Prc). The Prc phenotype was suppressed by nemadipine. Treatment: nemadipine Variation effect: Hypermorph gain of function; Curator_confirmed; Paper_evidence details
|
flaccid | Allele: n582 Curator: Karen Yook; Carol Bastiani
Paper evidence: Trent C, Tsung N & Horvitz HR, 1983; Kwok TC et al., 2008 Remark: floppy Variation effect: Hypomorph reduction of function; Curator_confirmed; Paper_evidence details
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constitutive egg laying | Allele: ad695 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals retained fewer embryos in utero than wild-type. Treatment: DMSO control conditions Variation effect: Hypermorph gain of function; Curator_confirmed; Paper_evidence details
| |
drug resistant | Allele: ad1006 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals were resistant to population growth retardation induced by nemadipine-A, a dihydropyridine (DHP) analog. In addition, L1 and L2 exhibited variable morphology at concentrations significantly greater than the concentration that induced Vab in wild-type larvae. Treatment: Animals were treated with various concentrations of nemadipine in DMSO. Variation effect: Hypomorph reduction of function; Curator_confirmed; Paper_evidence details
| |
dead eggs laid | Allele: n2368 Curator: Karen Yook
Person evidence: Jonathan Hodgkin Remark: Eggs of less than 10 nuclei are laid. n2368/+ has a phenotype similar to but weaker than n2368. Semi dominant: Person_evidence; Curator_confirmed details
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coiling frequency variant | Allele: n2368
details
| |
paralyzed arrested elongation two fold | life-stage: elongating embryo Ce, abnormal | Allele: st576 Curator: Karen Yook; Jolene S. Fernandes
Paper evidence: Williams BD & Waterston RH, 1994 Person evidence: Jonathan Hodgkin Remark: Severe Pat phenotype: Embryos are paralyzed at the 1.5-fold stage.; severe Pat, probable null phenotype details
|
short | Allele: | |
drug resistant | Allele: tr137 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals were resistant to population growth retardation induced by nemadipine-A, a dihydropyridine (DHP) analog. Treatment: Animals were treated with various concentrations of nemadipine in DMSO. details
| |
paralyzed arrested elongation two fold | life-stage: elongating embryo Ce, abnormal | Allele: st577 Curator: Karen Yook; Jolene S. Fernandes
Paper evidence: Williams BD & Waterston RH, 1994 Person evidence: Jonathan Hodgkin Remark: Pat.; Severe Pat phenotype: Embryos are paralyzed at the 1.5-fold stage.; severe Pat, probable null phenotype details
|
head bend angle variant | Allele: n2368
details
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drug resistant | Allele: tr134 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals were resistant to population growth retardation induced by nemadipine-A, a dihydropyridine (DHP) analog. Treatment: Animals were treated with various concentrations of nemadipine in DMSO. details
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tail bend angle variant | Allele: n2368
details
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egg laying response to drug variant | go-term: oviposition, abnormal | Allele: ad1006 Affected by molecule: nemadipine-A
Curator: Karen Yook Paper evidence: Kwok TC et al., 2008 Remark: Animals retained less eggs after treatment with the dihydropyridine (DHP) analog nemadipine compared to animals treated with DMSO alone; wild-type worms retained more eggs after treatment with the DHP anaolog. Treatment: 5uM nemadipine in DMSO or DMSO alone Variation effect: Hypomorph reduction of function; Curator_confirmed; Paper_evidence details
|
egg laying response to drug variant | go-term: oviposition, abnormal | Allele: tr86 Affected by molecule: nemadipine-A
Curator: Karen Yook Paper evidence: Kwok TC et al., 2008 Remark: The number of eggs in utero of worms treated with the dihydropyridine (DHP) analog nemadipine, did not significantly differ from in utero numbers of animals treated with DMSO alone. Treatment: 5uM nemadipine in DMSO or DMSO alone details
|
terminal bulb contraction variant | Allele: ad695 Curator: Karen Yook
Person evidence: Jonathan Hodgkin Remark: Terminal bulb stays contracted for longer than normal, sometimes > 1 sec. Corpus action is normal. Muscle hyperactivated, sticky pumping, short, ad695/+ similar but with weaker phenotypes. Semi dominant: Person_evidence; Curator_confirmed details
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spicules protrude |
| Allele: tr74 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Males had protruded spicules (Prc). The Prc phenotype was suppressed by nemadipine. Treatment: nemadipine Variation effect: Hypermorph gain of function; Curator_confirmed; Paper_evidence details
|
axon termination defective | anatomy-term: ALM, abnormal | Allele: tr134 Curator: Karen Yook
Paper evidence: Buddell, Tyler & Quinn, Christopher C, 2021 Remark: In egl-19(gof) mutants, we observed overextended ALM axons, where the axon extended past its normal termination point and terminated within the tip of the nose, whereas in wild-type, the axon terminates posterior to the tip of the nose. details
|
drug resistant | Allele: tr138 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals were resistant to population growth retardation induced by nemadipine-A, a dihydropyridine (DHP) analog. Treatment: Animals were treated with various concentrations of nemadipine in DMSO. details
| |
egg laying defective | Allele: ad1006 Affected by molecule: nemadipine-A
Curator: Karen Yook Paper evidence: Kwok TC et al., 2008 Remark: Animals retained significantly more eggs in utero than wild-type worms. Treatment: DMSO control conditions. Variation effect: Hypomorph reduction of function; Curator_confirmed; Paper_evidence details
| |
bag of worms | Allele: | |
fewer eggs in utero | Allele: n2368
details
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drug resistant | Allele: tr71 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals were resistant to population growth retardation induced by nemadipine-A, a dihydropyridine (DHP) analog. In addition, L1 and L2 exhibited variable morphology at concentrations significantly greater than the concentration that induced Vab in wild-type larvae. Treatment: Animals were treated with various concentrations of nemadipine in DMSO. details
| |
drug resistant | Allele: tr135 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals were resistant to population growth retardation induced by nemadipine-A, a dihydropyridine (DHP) analog. Treatment: Animals were treated with various concentrations of nemadipine in DMSO. details
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nose movement variant | Allele: n2368
details
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anus morphology variant | life-stage: adult male Ce, abnormal | Allele: ad695 Curator: Jolene S. Fernandes
Paper evidence: Avery L, 1993 Remark: Adult males have a blocked anus Semi dominant: Curator_confirmed; Paper_evidence details
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drug resistant | Allele: tr86 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals were resistant to population growth retardation induced by nemadipine-A, a dihydropyridine (DHP) analog. In addition, L1 and L2 exhibited variable morphology at concentrations significantly greater than the concentration that induced Vab in wild-type larvae. Treatment: Animals were treated with various concentrations of nemadipine in DMSO. details
| |
paralyzed arrested elongation two fold | life-stage: elongating embryo Ce, abnormal | Allele: st569 Curator: Jolene S. Fernandes
Paper evidence: Williams BD & Waterston RH, 1994 Remark: Severe Pat phenotype: Embryos are paralyzed at the 1.5-fold stage. details
|
constitutive egg laying | Allele: tr71 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals retained fewer embryos in utero than wild-type. Treatment: DMSO control conditions details
| |
lethal | Allele: tm8983 Curator: Karen Yook
Person evidence: National Bioresource Project c/o Dr. Shohei Mitani Remark: Classified as lethal OR sterile by the National BioResource Project of Japan. details
| |
egg laying response to drug variant | go-term: oviposition, abnormal | Allele: n582 Affected by molecule: nemadipine-A
Curator: Karen Yook Paper evidence: Kwok TC et al., 2008 Remark: Animals retained less eggs after treatment with dihydropyridine (DHP) analog nemadipine compared to animals treated with DMSO alone; wild-type worms retained more eggs after treatment with the DHP anaolog. Treatment: 5uM nemadipine in DMSO or DMSO alone Variation effect: Hypomorph reduction of function; Curator_confirmed; Paper_evidence details
|
spicules protrude |
| Allele: n2368 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Person evidence: Jonathan Hodgkin Remark: Males had protruded spicules (Prc). The Prc phenotype was suppressed by nemadipine.; Protruding spicules. n2368/+ has a phenotype similar to but weaker than n2368. Treatment: nemadipine Variation effect: Hypermorph gain of function; Curator_confirmed; Paper_evidence details
|
drug resistant | Allele: n2368 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals were resistant to population growth retardation induced by nemadipine-A, a dihydropyridine (DHP) analog. In addition, L1 and L2 exhibited variable morphology at concentrations significantly greater than the concentration that induced Vab in wild-type larvae. Treatment: Animals were treated with various concentrations of nemadipine in DMSO. Variation effect: Hypermorph gain of function; Curator_confirmed; Paper_evidence details
| |
flaccid | Allele: | |
drug resistant | Allele: tr91 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals were resistant to population growth retardation induced by nemadipine-A, a dihydropyridine (DHP) analog. Treatment: Animals were treated with various concentrations of nemadipine in DMSO. details
| |
drug resistant | Allele: ad695 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals were resistant to population growth retardation induced by nemadipine-A, a dihydropyridine (DHP) analog. In addition, L1 and L2 exhibited variable morphology at concentrations significantly greater than the concentration that induced Vab in wild-type larvae. Treatment: Animals were treated with various concentrations of nemadipine in DMSO. Variation effect: Hypermorph gain of function; Curator_confirmed; Paper_evidence details
| |
egg laying variant | Allele: n2368 Curator: Karen Yook
Person evidence: Jonathan Hodgkin Remark: Egl. n2368/+ has a phenotype similar to but weaker than n2368. Semi dominant: Person_evidence; Curator_confirmed details
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egg laying variant | go-term: oviposition, abnormal | Allele: tr74 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals retained slightly more eggs in utero compared to wild-type animals under the same conditions. Treatment: DMSO control conditions. details
|
spicules protrude |
| Allele: ad695 Affected by molecule: nemadipine-A
Curator: Karen Yook; Jolene S. Fernandes Paper evidence: Avery L, 1993; Kwok TC et al., 2008 Remark: Males had protruded spicules (Prc). The Prc phenotype was suppressed by nemadipine.; Adult males have protruding spicules Semi dominant: Curator_confirmed; Paper_evidence Variation effect: Hypermorph gain of function; Curator_confirmed; Paper_evidence details
|
drug resistant | Allele: tr88 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals were resistant to population growth retardation induced by nemadipine-A, a dihydropyridine (DHP) analog. Treatment: Animals were treated with various concentrations of nemadipine in DMSO. details
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drug resistant | Allele: tr136 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals were resistant to population growth retardation induced by nemadipine-A, a dihydropyridine (DHP) analog. Treatment: Animals were treated with various concentrations of nemadipine in DMSO. details
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drug resistant | Allele: tr78 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals were resistant to population growth retardation induced by nemadipine-A, a dihydropyridine (DHP) analog. Treatment: Animals were treated with various concentrations of nemadipine in DMSO. details
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drug resistant | Allele: tr87 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals were resistant to population growth retardation induced by nemadipine-A, a dihydropyridine (DHP) analog. Treatment: Animals were treated with various concentrations of nemadipine in DMSO. details
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body posture wavelength decreased | Allele: n2368
details
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egg laying response to drug variant | go-term: oviposition, abnormal | Allele: tr81 Affected by molecule: nemadipine-A
Curator: Karen Yook Paper evidence: Kwok TC et al., 2008 Remark: The number of eggs in utero of worms treated with the dihydropyridine (DHP) analog nemadipine, did not significantly differ from in utero numbers of animals treated with DMSO alone. Treatment: 5uM nemadipine in DMSO or DMSO alone details
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constitutive egg laying | Allele: tr76 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals retained fewer embryos in utero than wild-type. Treatment: DMSO control conditions details
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embryonic lethal | Allele: st577 Curator: Karen Yook
Person evidence: Jonathan Hodgkin Remark: embryonic lethal, probable null phenotype details
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spicule insertion defective |
| Allele: ad1006 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Males could not protrude their spicules. Treatment: DMSO control conditions. Variation effect: Hypomorph reduction of function; Curator_confirmed; Paper_evidence details
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drug resistant | Allele: tr93 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals were resistant to population growth retardation induced by nemadipine-A, a dihydropyridine (DHP) analog. In addition, L1 and L2 exhibited variable morphology at concentrations significantly greater than the concentration that induced Vab in wild-type larvae. Treatment: Animals were treated with various concentrations of nemadipine in DMSO. details
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drug resistant | Allele: tr69 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals were resistant to population growth retardation induced by nemadipine-A, a dihydropyridine (DHP) analog. In addition, L1 and L2 exhibited variable morphology at concentrations significantly greater than the concentration that induced Vab in wild-type larvae. Treatment: Animals were treated with various concentrations of nemadipine in DMSO. details
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spicules protrude |
| Allele: tr69 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Males had protruded spicules (Prc). The Prc phenotype was suppressed by nemadipine. Treatment: nemadipine Variation effect: Hypermorph gain of function; Curator_confirmed; Paper_evidence details
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drug resistant | Allele: tr70 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals were resistant to population growth retardation induced by nemadipine-A, a dihydropyridine (DHP) analog. Treatment: Animals were treated with various concentrations of nemadipine in DMSO. details
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male mating defective | life-stage: adult male Ce, abnormal | Allele: ad695 Curator: Jolene S. Fernandes
Paper evidence: Avery L, 1993 Semi dominant: Curator_confirmed; Paper_evidence details
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spicules protrude |
| Allele: tr93 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Males had protruded spicules (Prc). The Prc phenotype was suppressed by nemadipine. Treatment: nemadipine Variation effect: Hypermorph gain of function; Curator_confirmed; Paper_evidence details
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long | Allele: n582 Curator: Karen Yook; Carol Bastiani
Paper evidence: Trent C, Tsung N & Horvitz HR, 1983; Kwok TC et al., 2008 Variation effect: Hypomorph reduction of function; Curator_confirmed; Paper_evidence details
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eating variant | Allele: ad695 Curator: Karen Yook
Person evidence: Jonathan Hodgkin Remark: Weak Eat. ad695/+ similar but with weaker phenotypes. Semi dominant: Person_evidence; Curator_confirmed details
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constitutive egg laying | Allele: tr73 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals retained fewer embryos in utero than wild-type. Treatment: DMSO control conditions details
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amplitude of sinusoidal movement variant | Allele: n2368
details
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pausing variant | Allele: n2368
details
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paralyzed arrested elongation two fold | life-stage: elongating embryo Ce, abnormal | Allele: st571 Curator: Jolene S. Fernandes
Paper evidence: Williams BD & Waterston RH, 1994 Remark: Severe Pat phenotype: Embryos are paralyzed at the 1.5-fold stage. details
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muscle dystrophy | RNAi: WBRNAi00064260 Genotype: dys-1(cx-18); hlh-1(cc561)
Paper evidence: Mariol MC & Segalat L, 2001 Remark: The reduction of egl-19 by RNAi greatly reduces the muscle degeneration seen in dys-1(cx-18); hlh-1(cc561) animals. details
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egg laying variant | RNAi: | |
body wall muscle sarcomere morphology variant | anatomy-term: body wall muscle cell, abnormal | RNAi: WBRNAi00090077 Genotype: jIs01 [myo-3::GFP], translational fusion
Paper evidence: Shephard F, Adenle AA, Jacobson LA & Szewczyk NJ, 2011 Remark: RNAi was observed to significantly perturb myofibril/sarcomere morphology in body wall muscles, as determined by observation of a MYO-3::GFP translational fusion reporter. This affect was observed after chronic RNAi exposure (RNAi continuously for two generations), as well as after acute exposure to RNAi only during adulthood. details
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protruding vulva | RNAi: | |
egg laying defective | RNAi: | |
chemotaxis variant | RNAi: WBRNAi00113903 Genotype: ixEx232[gcy-7p::gfp; unc-122p::gfp]; ixEx234[gcy-7p::egl-19(RNAi); gcy-7p::gfp(RNAi); lin-44p::mRFP].
Paper evidence: Shindou T et al., 2019 details
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sterile progeny | RNAi: | |
clear | RNAi: |
Phenotype | Entities Affected | Supporting Evidence |
---|---|---|
body length variant | Allele: tr89 Curator: Karen Yook
Paper evidence: Kwok TC et al., 2008 Remark: Animals were approximately wild-type in length. Treatment: DMSO control conditions. details
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loss of asymmetry ASE | Allele: ad695 Curator: Jolene S. Fernandes
Paper evidence: Chang S, Johnston RJ & Hobert O, 2003 Remark: No disruption of ASE asymmetry (as seen with lim-6 reporters) details
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protein degradation variant | Allele: ad695 Curator: Chris Grove
Paper evidence: Shephard F, Adenle AA, Jacobson LA & Szewczyk NJ, 2011 Remark: Table S2 details
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body wall muscle myosin organization defective | life-stage: elongating embryo Ce, abnormal | Allele: st556 Curator: Jolene S. Fernandes
Paper evidence: Williams BD & Waterston RH, 1994 Remark: mhcA is partially organized into A-bands. Treatment: antibody staining with anti-mhcA details
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fat content variant | Allele: ad1015 Curator: Jolene S. Fernandes
Paper evidence: Srinivasan S et al., 2008 Remark: Mutants had wild-type fat content Treatment: Fat content was visualized by Nile red staining details
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egg laying response to drug variant | go-term: oviposition, abnormal | Allele: ad695 Affected by molecule: nemadipine-A
Curator: Karen Yook Paper evidence: Kwok TC et al., 2008 Remark: Animals retained more eggs after treatment with dihydropyridine (DHP) analog nemadipine, compared to control animals treated with DMSO alone. Treatment: 5uM nemadipine in DMSO or DMSO alone Variation effect: Hypermorph gain of function; Curator_confirmed; Paper_evidence details
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serotonin induced fat reduction variant | Allele: ad1015 Curator: Jolene S. Fernandes
Paper evidence: Srinivasan S et al., 2008 Remark: Mutants were susceptible to the fat-reducing effects of exogenously administered serotonin Treatment: Reduced fat content of 5-HT-treated animals was visualized by Nile red staining and confirmed by thin-layer chromatography (TLC) quantitation of total triglycerides extracted from vehicle- and 5-HT-treated worms and by Sudan black fat staining details
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egg laying response to drug variant | go-term: oviposition, abnormal | Allele: tr79 Affected by molecule: nemadipine-A
Curator: Karen Yook Paper evidence: Kwok TC et al., 2008 Remark: Animals retained more eggs after treatment with dihydropyridine (DHP) analog nemadipine, compared to control animals treated with DMSO alone. Treatment: 5uM nemadipine in DMSO or DMSO alone details
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egg laying response to drug variant | go-term: oviposition, abnormal | Allele: tr73 Affected by molecule: nemadipine-A
Curator: Karen Yook Paper evidence: Kwok TC et al., 2008 Remark: Animals retained more eggs after treatment with dihydropyridine (DHP) analog nemadipine, compared to control animals treated with DMSO alone. Treatment: 5uM nemadipine in DMSO or DMSO alone details
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pumping absent | life-stage: elongating embryo Ce, abnormal | Allele: st577 Curator: Jolene S. Fernandes
Paper evidence: Williams BD & Waterston RH, 1994 Remark: Pharyngeal pumping movements were observed in mutants. details
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body wall muscle actin organization defective | life-stage: elongating embryo Ce, abnormal | Allele: st569 Curator: Jolene S. Fernandes
Paper evidence: Williams BD & Waterston RH, 1994 Remark: Well organized actin staining pattern. Treatment: antibody staining with anti-actin details
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pumping absent | life-stage: elongating embryo Ce, abnormal | Allele: st571 Curator: Jolene S. Fernandes
Paper evidence: Williams BD & Waterston RH, 1994 Remark: Pharyngeal pumping movements were observed in mutants. details
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egg laying response to drug variant | go-term: oviposition, abnormal | Allele: tr92 Affected by molecule: nemadipine-A
Curator: Karen Yook Paper evidence: Kwok TC et al., 2008 Remark: Animals retained more eggs after treatment with dihydropyridine (DHP) analog nemadipine, compared to control animals treated with DMSO alone. Treatment: 5uM nemadipine in DMSO or DMSO alone details
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egg laying response to drug variant | Allele: n2368 Affected by molecule: nemadipine-A
Curator: Karen Yook Paper evidence: Kwok TC et al., 2008 Remark: Animals retained more eggs after treatment with dihydropyridine (DHP) analog nemadipine, compared to control animals treated with DMSO alone. Treatment: 5uM nemadipine in DMSO or DMSO alone Variation effect: Hypermorph gain of function; Curator_confirmed; Paper_evidence details
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egg laying response to drug variant | go-term: oviposition, abnormal | Allele: tr76 Affected by molecule: nemadipine-A
Curator: Karen Yook Paper evidence: Kwok TC et al., 2008 Remark: Animals retained more eggs after treatment with dihydropyridine (DHP) analog nemadipine, compared to control animals treated with DMSO alone. Treatment: 5uM nemadipine in DMSO or DMSO alone details
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protein degradation variant | Allele: n582 Curator: Chris Grove
Paper evidence: Shephard F, Adenle AA, Jacobson LA & Szewczyk NJ, 2011 Remark: Table S2 details
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egg laying response to drug variant | go-term: oviposition, abnormal | Allele: tr132 Affected by molecule: nemadipine-A
Curator: Karen Yook Paper evidence: Kwok TC et al., 2008 Remark: Animals retained more eggs after treatment with dihydropyridine (DHP) analog nemadipine, compared to control animals treated with DMSO alone. Treatment: 5uM nemadipine in DMSO or DMSO alone details
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egg laying response to drug variant | go-term: oviposition, abnormal | Allele: tr71 Affected by molecule: nemadipine-A
Curator: Karen Yook Paper evidence: Kwok TC et al., 2008 Remark: Animals retained more eggs after treatment with dihydropyridine (DHP) analog nemadipine, compared to control animals treated with DMSO alone. Treatment: 5uM nemadipine in DMSO or DMSO alone details
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egg laying response to drug variant | go-term: oviposition, abnormal | Allele: tr69 Affected by molecule: nemadipine-A
Curator: Karen Yook Paper evidence: Kwok TC et al., 2008 Remark: Animals retained more eggs after treatment with dihydropyridine (DHP) analog nemadipine, compared to control animals treated with DMSO alone. Treatment: 5uM nemadipine in DMSO or DMSO alone details
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egg laying response to drug variant | go-term: oviposition, abnormal | Allele: tr89 Affected by molecule: nemadipine-A
Curator: Karen Yook Paper evidence: Kwok TC et al., 2008 Remark: Animals retained more eggs after treatment with dihydropyridine (DHP) analog nemadipine, compared to control animals treated with DMSO alone. Treatment: 5uM nemadipine in DMSO or DMSO alone details
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egg laying imipramine resistant | Allele: n582 Curator: Carol Bastiani
Paper evidence: Trent C, Tsung N & Horvitz HR, 1983 Remark: Animals respond only weakly to imipramine. Treatment: 0.75 mg/ml imipramine details
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exploded through vulva | RNAi: | |
organism morphology variant | RNAi: | |
organism morphology variant | RNAi: | |
protruding vulva | RNAi: | |
mitochondria morphology variant | anatomy-term: body wall muscle cell, abnormal | RNAi: WBRNAi00090235 Genotype: ccIs4251 [Pmyo-3::MitGFP, Pmyo-3::NLS::GFP-lacZ]
Paper evidence: Shephard F, Adenle AA, Jacobson LA & Szewczyk NJ, 2011 details
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locomotion variant | RNAi: | |
roller | RNAi: | |
sterile | RNAi: | |
lethal | RNAi: | |
maternal sterile | RNAi: | |
maternal sterile | RNAi: | |
nematode phenotype | RNAi: | |
dumpy | RNAi: | |
growth rate variant | RNAi: | |
nematode phenotype | RNAi: | |
protein degradation variant | RNAi: WBRNAi00089917 Genotype: ccIs55 [unc-54::lacZ]
Paper evidence: Shephard F, Adenle AA, Jacobson LA & Szewczyk NJ, 2011 details
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embryonic lethal | RNAi: | |
organism morphology variant | RNAi: | |
embryonic lethal | RNAi: |
The following phenotypes are indirectly caused or affected by some perturbation of egl-19 in the context of a genetic interaction :
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