- gene: gly-5 [Browse genome (BioProject PRJNA13758)] [Search on AGR]
Caenorhabditis elegans Enables polypeptide N-acetylgalactosaminyltransferase activity. Involved in protein O-linked glycosylation via threonine. Predicted to be located in Golgi apparatus. Human ortholog(s) of this gene implicated in colorectal cancer. Is an ortholog of human GALNT12 (polypeptide N-acetylgalactosaminyltransferase 12); GALNT4 (polypeptide N-acetylgalactosaminyltransferase 4); and POC1B-GALNT4 (POC1B-GALNT4 readthrough).
- sequence feature: WBsf718010
Caenorhabditis elegans This is a predicted enhancer region. These are intergenic TF-binding sites >500 bp from a gene start which overlap a TSS cluster, excluding regions that appear to be unannotated promoters based on having a signature of high H3K4me3/low H3K4me1. Nearest downstream gene=Y39E4B.12. Surounding gene organisation=tandem
- sequence feature: WBsf718009
Caenorhabditis elegans This is a predicted enhancer region. These are intergenic TF-binding sites >500 bp from a gene start which overlap a TSS cluster, excluding regions that appear to be unannotated promoters based on having a signature of high H3K4me3/low H3K4me1. Nearest downstream gene=Y39E4B.12. Surounding gene organisation=tandem
- sequence feature: WBsf978522
Caenorhabditis elegans Promoter region of Y39E4B.7.
- sequence feature: WBsf978911
Caenorhabditis elegans Promoter region of Y39E4B.2.
- transgene: sEx10798
Caenorhabditis elegans [Y39E4B.1::gfp]
- transgene: sEx11425
Caenorhabditis elegans [rCes Y39E4B.8::GFP + pCeh361]
- sequence feature: WBsf981639
Caenorhabditis elegans ATFS-1 binding site near 'Y39E4B.6'
- strain: VC3230
Caenorhabditis elegans - sequence feature: WBsf898314
Caenorhabditis elegans This has NO EST evidence; This overlaps with coding transcript: Y39E4B.1.2 Y39E4B.1.1; Match to Variation WBVar00567868 found